Whole-Genome Sequencing of a Colistin-Resistant Acinetobacter baumannii Strain Isolated at a Tertiary Health Facility in Pretoria, South Africa

Keyphrases

• South Africa 100%
• Tertiary Care Hospital 100%
• Pretoria 100%
• Whole Genome Sequencing 100%
• Colistin-resistant 100%
• Acinetobacter Baumannii (A. baumannii) 100%
• Associated Genes 100%
• Cefepime 66%
• Colistin Resistance 66%
• Genome Analysis 66%
• Quantitative PCR 66%
• Resistance Genes 66%
• Conventional PCR 66%
• Sequence Type 66%
• Acinetobacter 66%
• South African 33%
• Antimicrobial 33%
• Gentamycin 33%
• Ceftriaxone 33%
• Antibiotics 33%
• Aminoglycosides 33%
• Ciprofloxacin 33%
• Antimicrobial Susceptibility 33%
• Antimicrobial Susceptibility Pattern 33%
• Colistin 33%
• Genetic Resistance 33%
• Resistance Profile 33%
• Meropenem 33%
• Imipenem 33%
• Lactams 33%
• Adhesion 33%
• Efflux Pump 33%
• Ceftazidime 33%
• Broth Microdilution 33%
• Piperacillin-tazobactam 33%
• Mcr-1 33%
• Virulence Factors 33%
• Trimethoprim-sulfamethoxazole (TMP-SMX) 33%
• BlaOXA 33%
• AdeABC Efflux Pump 33%
• Tigecycline 33%
• BlaOXA-23 33%
• Biofilm Formation 33%
• Quorum Sensing 33%
• Efflux Pump Inhibitors 33%
• AdeB 33%
• AdeRS 33%
• Phenotypic Evaluation 33%
• Iron Acquisition Systems 33%
• CsuE 33%
• Bash 33%
• BfmR 33%
• Virulence Analysis 33%
• AbaR 33%
• Classification Basis 33%
• BauA 33%
• Niche Establishment 33%
• BarA 33%
• Formation System 33%
• EntE 33%
• Tracheal Aspirate 33%
• Louis Pasteur 33%
• AbaI 33%
• Basa 33%

Biochemistry, Genetics and Molecular Biology

• Colistin 100%
• Acinetobacter Baumannii 100%
• Whole Genome Sequencing 100%
• Antibiotic Sensitivity 40%
• Real-Time Polymerase Chain Reaction 40%
• Acinetobacter 40%
• Minimum Inhibitory Concentration 20%
• Aminoglycoside 20%
• Gentamicin 20%
• Ciprofloxacin 20%
• Cefepime 20%
• Imipenem 20%
• Broth Dilution 20%
• Protein Sequencing 20%
• Ceftriaxone 20%
• Ceftazidime 20%
• Virulence Factor 20%
• Cefotaxime 20%
• Quorum Sensing 20%
• Mosaicism 20%
• Tazobactam 20%
• Biofilm 20%
• Sulfamethoxazole 20%
• Trimethoprim 20%

Immunology and Microbiology

• Acinetobacter Baumannii 100%
• Colistin 100%
• Whole Genome Sequencing 100%
• Antibiotic Sensitivity 40%
• Real-Time Polymerase Chain Reaction 40%
• Acinetobacter 40%
• Minimum Inhibitory Concentration 20%
• Sequence Analysis 20%
• Biofilm 20%
• Mosaicism 20%
• Broth Dilution 20%
• Virulence Factor 20%
• Quorum Sensing 20%